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Commit 31037bdd authored by David Bommes's avatar David Bommes
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added Eigen3 support 

git-svn-id: http://www.openflipper.org/svnrepo/CoMISo/trunk@67 1355f012-dd97-4b2f-ae87-10fa9f823a57
parent 75338fad
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Showing with 447 additions and 100 deletions
CoMISo/CMakeLists.txt
View file @ 31037bdd
......@@ -97,6 +97,15 @@ else ()
set (COMISO_IPOPT_CONFIG_FILE_SETTINGS "#define COMISO_IPOPT_AVAILABLE 0" )
endif ()
find_package (Eigen3)
if (Eigen3_FOUND )
set (COMISO_Eigen3_CONFIG_FILE_SETTINGS "#define COMISO_Eigen3_AVAILABLE 1" )
list( APPEND COMISO_INCLUDE_DIRECTORIES ${Eigen3_INCLUDE_DIR} )
else ()
message (STATUS "Eigen3 not found!")
set (COMISO_Eigen3_CONFIG_FILE_SETTINGS "#define COMISO_Eigen3_AVAILABLE 0" )
endif ()
if( EXISTS "${CMAKE_SOURCE_DIR}/Examples/factored_solver/CMakeLists.txt" )
add_subdirectory (Examples/factored_solver)
endif()
......@@ -113,6 +122,9 @@ endif()
if( EXISTS "${CMAKE_SOURCE_DIR}/Examples/small_factored_example/CMakeLists.txt" )
add_subdirectory (Examples/small_factored_example)
endif()
if( EXISTS "${CMAKE_SOURCE_DIR}/Examples/super_sparse_matrix/CMakeLists.txt" )
add_subdirectory (Examples/super_sparse_matrix)
endif()
include_directories (
..
......
CoMISo/NSolver/IPOPTSolver.cc
View file @ 31037bdd
......@@ -24,7 +24,7 @@ namespace COMISO {
int
IPOPTSolver::
solve(NProblemGmmInterface* _problem, std::vector<NConstraintGmmInterface*>& _constraints)
solve(NProblemGmmInterface* _problem, std::vector<NConstraintInterface*>& _constraints)
{
//----------------------------------------------------------------------------
// 1. Create an instance of IPOPT NLP
......@@ -38,7 +38,7 @@ solve(NProblemGmmInterface* _problem, std::vector<NConstraintGmmInterface*>& _co
Ipopt::SmartPtr<Ipopt::IpoptApplication> app = IpoptApplicationFactory();
app->Options()->SetStringValue("linear_solver", "ma57");
// app->Options()->SetStringValue("derivative_test", "second-order");
// app->Options()->SetStringValue("derivative_test", "second-order");
// app->Options()->SetIntegerValue("print_level", 0);
// Initialize the IpoptApplication and process the options
......@@ -89,11 +89,12 @@ bool NProblemIPOPT::get_nlp_info(Index& n, Index& m, Index& nnz_jac_g,
// ToDo: perturb x
// nonzeros in the jacobian of C_ and the hessian of the lagrangian
SVectorNP g;
SMatrixNP H;
problem_->eval_hessian(&(x[0]), H);
SMatrixNP HP;
SVectorNC g;
SMatrixNC H;
problem_->eval_hessian(&(x[0]), HP);
nnz_jac_g = 0;
nnz_h_lag = gmm::nnz(H);
nnz_h_lag = 0;
// clear old data
jac_g_iRow_.clear();
......@@ -105,7 +106,7 @@ bool NProblemIPOPT::get_nlp_info(Index& n, Index& m, Index& nnz_jac_g,
// iterate over rows
for( int i=0; i<n; ++i)
{
SVectorNP& ri = H.row(i);
SVectorNP& ri = HP.row(i);
SVectorNP_citer v_it = gmm::vect_const_begin(ri);
SVectorNP_citer v_end = gmm::vect_const_end (ri);
......@@ -117,6 +118,7 @@ bool NProblemIPOPT::get_nlp_info(Index& n, Index& m, Index& nnz_jac_g,
{
h_lag_iRow_.push_back(i);
h_lag_jCol_.push_back(v_it.index());
++nnz_h_lag;
}
}
}
......@@ -127,36 +129,26 @@ bool NProblemIPOPT::get_nlp_info(Index& n, Index& m, Index& nnz_jac_g,
{
constraints_[i]->eval_gradient(&(x[0]),g);
constraints_[i]->eval_hessian (&(x[0]),H);
nnz_jac_g += gmm::nnz(g);
nnz_h_lag += gmm::nnz(H);
// build table
SVectorNP_citer v_it = gmm::vect_const_begin(g);
SVectorNP_citer v_end = gmm::vect_const_end (g);
for(; v_it != v_end; ++v_it)
// iterate over sparse vector
SVectorNC::InnerIterator v_it(g);
for(; v_it; ++v_it)
{
jac_g_iRow_.push_back(i);
jac_g_jCol_.push_back(v_it.index());
++nnz_jac_g;
}
for( int i=0; i<n; ++i)
{
SVectorNP& ri = H.row(i);
v_it = gmm::vect_const_begin(ri);
v_end = gmm::vect_const_end (ri);
for(; v_it != v_end; ++v_it)
// iterate over superSparseMatrix
SMatrixNC::iterator m_it = H.begin();
SMatrixNC::iterator m_end = H.end();
for(; m_it != m_end; ++m_it)
if( m_it.row() >= m_it.col())
{
// store lower triangular part only
if( i >= (int)v_it.index())
{
h_lag_iRow_.push_back(i);
h_lag_jCol_.push_back(v_it.index());
}
h_lag_iRow_.push_back(m_it.row());
h_lag_jCol_.push_back(m_it.col());
++nnz_h_lag;
}
}
}
// store for error checking...
......@@ -192,10 +184,10 @@ bool NProblemIPOPT::get_bounds_info(Index n, Number* x_l, Number* x_u,
// enum ConstraintType {NC_EQUAL, NC_LESS_EQUAL, NC_GREATER_EQUAL};
switch(constraints_[i]->constraint_type())
{
case NConstraintGmmInterface::NC_EQUAL : g_u[i] = 0.0 ; g_l[i] = 0.0 ; break;
case NConstraintGmmInterface::NC_LESS_EQUAL : g_u[i] = 0.0 ; g_l[i] = -1.0e19; break;
case NConstraintGmmInterface::NC_GREATER_EQUAL : g_u[i] = 1.0e19; g_l[i] = 0.0 ; break;
default : g_u[i] = 1.0e19; g_l[i] = -1.0e19; break;
case NConstraintInterface::NC_EQUAL : g_u[i] = 0.0 ; g_l[i] = 0.0 ; break;
case NConstraintInterface::NC_LESS_EQUAL : g_u[i] = 0.0 ; g_l[i] = -1.0e19; break;
case NConstraintInterface::NC_GREATER_EQUAL : g_u[i] = 1.0e19; g_l[i] = 0.0 ; break;
default : g_u[i] = 1.0e19; g_l[i] = -1.0e19; break;
}
}
......@@ -273,20 +265,18 @@ bool NProblemIPOPT::eval_jac_g(Index n, const Number* x, bool new_x,
// return the structure of the jacobian of the constraints
// global index
int gi = 0;
SVectorNP g;
SVectorNC g;
for( int i=0; i<m; ++i)
{
constraints_[i]->eval_gradient(x, g);
// iterate over non-zero values
SVectorNP_citer it = gmm::vect_const_begin(g);
SVectorNP_citer ite = gmm::vect_const_end(g);
SVectorNC::InnerIterator v_it(g);
for (; it != ite; ++it)
for( ; v_it; ++v_it)
{
if(gi < nele_jac)
values[gi] = *it;
values[gi] = v_it.value();
++gi;
}
}
......@@ -322,12 +312,11 @@ bool NProblemIPOPT::eval_h(Index n, const Number* x, bool new_x,
int gi = 0;
// get hessian of problem
SMatrixNP H;
problem_->eval_hessian(x, H);
problem_->eval_hessian(x, HP_);
for( int i=0; i<n; ++i)
{
SVectorNP& ri = H.row(i);
SVectorNP& ri = HP_.row(i);
SVectorNP_citer v_it = gmm::vect_const_begin(ri);
SVectorNP_citer v_end = gmm::vect_const_end (ri);
......@@ -347,24 +336,20 @@ bool NProblemIPOPT::eval_h(Index n, const Number* x, bool new_x,
// Hessians of Constraints
for(unsigned int j=0; j<constraints_.size(); ++j)
{
SMatrixNC H;
constraints_[j]->eval_hessian(x, H);
for( int i=0; i<n; ++i)
{
SVectorNP& ri = H.row(i);
SMatrixNC::iterator m_it = H.begin();
SMatrixNC::iterator m_end = H.end();
SVectorNP_citer v_it = gmm::vect_const_begin(ri);
SVectorNP_citer v_end = gmm::vect_const_end (ri);
for(; v_it != v_end; ++v_it)
for(; m_it != m_end; ++m_it)
{
// store lower triangular part only
if( m_it.row() >= m_it.col())
{
// store lower triangular part only
if( i >= (int)v_it.index())
{
if( gi < nele_hess)
values[gi] = lambda[j]*(*v_it);
++gi;
}
if( gi < nele_hess)
values[gi] = lambda[j]*(*m_it);
++gi;
}
}
}
......@@ -398,4 +383,4 @@ void NProblemIPOPT::finalize_solution(SolverReturn status,
} // namespace COMISO
//=============================================================================
#endif // COMISO_IPOPT_AVAILABLE
//=============================================================================
\ No newline at end of file
//=============================================================================
CoMISo/NSolver/IPOPTSolver.hh
View file @ 31037bdd
......@@ -19,7 +19,7 @@
#include <cstddef>
#include <gmm/gmm.h>
#include "NProblemGmmInterface.hh"
#include "NConstraintGmmInterface.hh"
#include "NConstraintInterface.hh"
#include <IpTNLP.hpp>
#include <IpIpoptApplication.hpp>
#include <IpSolveStatistics.hpp>
......@@ -78,7 +78,7 @@ public:
// };
//------------------------------------------------------
int solve(NProblemGmmInterface* _problem, std::vector<NConstraintGmmInterface*>& _constraints);
int solve(NProblemGmmInterface* _problem, std::vector<NConstraintInterface*>& _constraints);
protected:
double* P(std::vector<double>& _v)
......@@ -108,8 +108,11 @@ public:
typedef Ipopt::IpoptData IpoptData;
typedef Ipopt::IpoptCalculatedQuantities IpoptCalculatedQuantities;
typedef NConstraintGmmInterface::SVectorNP SVectorNP;
typedef NConstraintGmmInterface::SMatrixNP SMatrixNP;
// sparse matrix and vector types
typedef NConstraintInterface::SVectorNC SVectorNC;
typedef NConstraintInterface::SMatrixNC SMatrixNC;
typedef gmm::wsvector<double> SVectorNP;
typedef NProblemGmmInterface::SMatrixNP SMatrixNP;
typedef gmm::array1D_reference< double* > VectorPT;
typedef gmm::array1D_reference< const double* > VectorPTC;
......@@ -121,7 +124,7 @@ public:
typedef typename gmm::linalg_traits<SVectorNP>::iterator SVectorNP_iter;
/** default constructor */
NProblemIPOPT(NProblemGmmInterface* _problem, std::vector<NConstraintGmmInterface*>& _constraints)
NProblemIPOPT(NProblemGmmInterface* _problem, std::vector<NConstraintInterface*>& _constraints)
: problem_(_problem), constraints_(_constraints) {}
/** default destructor */
......@@ -205,7 +208,7 @@ private:
// pointer to problem instance
NProblemGmmInterface* problem_;
// reference to constraints vector
std::vector<NConstraintGmmInterface*>& constraints_;
std::vector<NConstraintInterface*>& constraints_;
int nnz_jac_g_;
int nnz_h_lag_;
......@@ -215,6 +218,9 @@ private:
std::vector<Index> jac_g_jCol_;
std::vector<Index> h_lag_iRow_;
std::vector<Index> h_lag_jCol_;
// Sparse Matrix of problem (don't initialize every time!!!)
SMatrixNP HP_;
};
......
CoMISo/NSolver/LinearConstraint.hh
View file @ 31037bdd
......@@ -11,8 +11,7 @@
//== INCLUDES =================================================================
#include <gmm/gmm.h>
#include "NConstraintGmmInterface.hh"
#include "NConstraintInterface.hh"
//== FORWARDDECLARATIONS ======================================================
......@@ -30,13 +29,9 @@ namespace COMISO {
A more elaborate description follows.
*/
class LinearConstraint : public NConstraintGmmInterface
class LinearConstraint : public NConstraintInterface
{
public:
// ToDo: appropriate Vector/MatrixType ???
typedef gmm::wsvector<double> SVectorNP;
typedef gmm::row_matrix< SVectorNP > SMatrixNP;
// use c-arrays as vectors for gmm
typedef gmm::array1D_reference<double*> VectorPT;
......@@ -45,31 +40,13 @@ public:
// enum ConstraintType {NC_EQUAL, NC_LESS_EQUAL, NC_GREATER_EQUAL};
/// Default constructor
LinearConstraint(const ConstraintType _type = NC_EQUAL) : NConstraintGmmInterface(_type)
LinearConstraint(const ConstraintType _type = NC_EQUAL) : NConstraintInterface(_type)
{}
// linear equation of the form -> coeffs_^T * (x,1) =_type= 0
LinearConstraint(const SVectorNP& _coeffs_plus_const, const ConstraintType _type = NC_EQUAL) : NConstraintGmmInterface(_type)
{
int n = gmm::vect_size(_coeffs_plus_const)-1;
gmm::resize(coeffs_, n+1);
gmm::copy(_coeffs_plus_const, coeffs_);
if( n >= 0)
b_ = coeffs_[n];
else
b_ = 0.0;
gmm::resize(coeffs_, n);
}
// linear equation of the form -> coeffs_^T * (x,1) =_type= 0
LinearConstraint(const SVectorNP& _coeffs, const double _b, const ConstraintType _type = NC_EQUAL) : NConstraintGmmInterface(_type)
LinearConstraint(const SVectorNC& _coeffs, const double _b, const ConstraintType _type = NC_EQUAL) : NConstraintInterface(_type)
{
int n = gmm::vect_size(_coeffs);
gmm::resize(coeffs_, n);
gmm::copy(_coeffs, coeffs_);
coeffs_ = _coeffs;
b_ = _b;
}
......@@ -78,24 +55,29 @@ public:
virtual int n_unknowns()
{
return gmm::vect_size(coeffs_);
return coeffs_.innerSize();
}
virtual double eval_constraint ( const double* _x )
{
return (gmm::vect_sp(coeffs_, VectorPT((double*)_x, gmm::vect_size(coeffs_))) + b_);
double v = b_;
SVectorNC::InnerIterator c_it(coeffs_);
for(; c_it; ++c_it)
v += c_it.value()*_x[c_it.index()];
return v;
}
virtual void eval_gradient( const double* _x, SVectorNP& _g )
virtual void eval_gradient( const double* _x, SVectorNC& _g )
{
gmm::resize(_g, gmm::vect_size(coeffs_));
gmm::copy (coeffs_, _g);
_g = coeffs_;
}
virtual void eval_hessian ( const double* _x, SMatrixNP& _h )
virtual void eval_hessian ( const double* _x, SMatrixNC& _h )
{
gmm::resize(_h, gmm::vect_size(coeffs_), gmm::vect_size(coeffs_));
gmm::clear(_h);
_h.clear();
_h.resize(coeffs_.innerSize(), coeffs_.innerSize());
}
// inherited from base
......@@ -104,7 +86,7 @@ public:
private:
// linear equation of the form -> coeffs_^T * x + b_
SVectorNP coeffs_;
SVectorNC coeffs_;
double b_;
};
......
CoMISo/NSolver/NConstraintInterface.hh 0 → 100644
View file @ 31037bdd
//=============================================================================
//
// CLASS NConstraintInterface
//
//=============================================================================
#ifndef COMISO_NCONSTRAINTINTERFACE_HH
#define COMISO_NCONSTRAINTINTERFACE_HH
//== INCLUDES =================================================================
#include "SuperSparseMatrixT.hh"
#define EIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET
#include <Eigen/Sparse>
//== FORWARDDECLARATIONS ======================================================
//== NAMESPACES ===============================================================
namespace COMISO {
//== CLASS DEFINITION =========================================================
/** \class NProblemGmmInterface NProblemGmmInterface.hh <ACG/.../NPRoblemGmmInterface.hh>
Brief Description.
A more elaborate description follows.
*/
class NConstraintInterface
{
public:
// define Sparse Datatypes
typedef Eigen::SparseVector<double> SVectorNC;
typedef SuperSparseMatrixT<double> SMatrixNC;
// different types of constraints
enum ConstraintType {NC_EQUAL, NC_LESS_EQUAL, NC_GREATER_EQUAL};
/// Default constructor
NConstraintInterface(const ConstraintType _type = NC_EQUAL) : type_(_type) {}
/// Destructor
~NConstraintInterface() {}
virtual int n_unknowns ( ) = 0;
virtual double eval_constraint ( const double* _x ) = 0;
virtual void eval_gradient ( const double* _x, SVectorNC& _g ) = 0;
virtual void eval_hessian ( const double* _x, SMatrixNC& _h ) = 0;
virtual ConstraintType constraint_type ( ) { return type_; }
virtual bool is_satisfied ( const double* _x, double _eps = 1e-6 )
{
switch( type_)
{
case NC_EQUAL : return (fabs(eval_constraint(_x)) <= _eps); break;
case NC_LESS_EQUAL : return ( eval_constraint(_x) <= _eps); break;
case NC_GREATER_EQUAL: return ( eval_constraint(_x) >= -_eps); break;
}
return false;
}
virtual double gradient_update_factor( const double* _x, double _eps = 1e-6 )
{
double val = eval_constraint(_x);
bool upper_bound_ok = ( val <= _eps);
bool lower_bound_ok = ( val >= -_eps);
if(upper_bound_ok)
{
if(lower_bound_ok || type_ == NC_LESS_EQUAL) return 0.0;
else return 1.0;
}
else
{
if(lower_bound_ok && type_ == NC_GREATER_EQUAL) return 0.0;
else return -1.0;
}
}
private:
// constraint type
ConstraintType type_;
};
//=============================================================================
} // namespace COMISO
//=============================================================================
#endif // ACG_NCONSTRAINTINTERFACE_HH defined
//=============================================================================
CoMISo/NSolver/NProblemInterface.hh 0 → 100644
View file @ 31037bdd
//=============================================================================
//
// CLASS NProblemGmmInterface
//
//=============================================================================
#ifndef COMISO_NPROBLEMINTERFACE_HH
#define COMISO_NPROBLEMINTERFACE_HH
//== INCLUDES =================================================================
#define EIGEN_YES_I_KNOW_SPARSE_MODULE_IS_NOT_STABLE_YET
#include <Eigen/Sparse>
//== FORWARDDECLARATIONS ======================================================
//== NAMESPACES ===============================================================
namespace COMISO {
//== CLASS DEFINITION =========================================================
/** \class NProblemGmmInterface NProblemGmmInterface.hh <ACG/.../NPRoblemGmmInterface.hh>
Brief Description.
A more elaborate description follows.
*/
class NProblemInterface
{
public:
// Sparse Matrix Type
typedef Eigen::DynamicSparseMatrix<double,ColMajor> SMatrixNP;
/// Default constructor
NProblemInterface() {}
/// Destructor
~NProblemInterface() {}
virtual int n_unknowns ( ) = 0;
virtual void initial_x ( double* _x ) = 0;
virtual double eval_f ( const double* _x ) = 0;
virtual void eval_gradient( const double* _x, double* _g) = 0;
virtual void eval_hessian ( const double* _x, SMatrixNP& _H) = 0;
virtual void store_result ( const double* _x ) = 0;
};
//=============================================================================
} // namespace COMISO
//=============================================================================
#endif // COMISO_NPROBLEMGMMINTERFACE_HH defined
//=============================================================================
CoMISo/NSolver/SuperSparseMatrixT.cc 0 → 100644
View file @ 31037bdd
//=============================================================================
//
// CLASS SuperSparseMatrixT - IMPLEMENTATION
//
//=============================================================================
#define COMISO_SUPERSPARSEMATRIXT_C
//== INCLUDES =================================================================
#include "SuperSparseMatrixT.hh"
//== NAMESPACES ===============================================================
namespace COMISO {
//== IMPLEMENTATION ==========================================================
//-----------------------------------------------------------------------------
//=============================================================================
} // namespace COMISO
//=============================================================================
CoMISo/NSolver/SuperSparseMatrixT.hh 0 → 100644
View file @ 31037bdd
//=============================================================================
//
// CLASS SuperSparseMatrixT
//
//=============================================================================
#ifndef COMISO_SUPERSPARSEMATRIXT_HH
#define COMISO_SUPERSPARSEMATRIXT_HH
//== INCLUDES =================================================================
#include <iostream>
#include <map>
#include <math.h>
//== FORWARDDECLARATIONS ======================================================
//== NAMESPACES ===============================================================
namespace COMISO {
//== CLASS DEFINITION =========================================================
/** \class SuperSparseMatrixT SuperSparseMatrixT.hh <COMISO/.../SuperSparseMatrixT.hh>
Brief Description.
A more elaborate description follows.
*/
template <class VType>
class SuperSparseMatrixT
{
public:
// value type
typedef VType VT;
typedef std::pair<unsigned int, unsigned int> PII;
// iterate over elements
class iterator
{